Molecular Dynamics and Analysis using BRIDGE
Thursday, 6 December 2018 - 08:00
  • Monday, 3 December 2018
  • Tuesday, 4 December 2018
  • Wednesday, 5 December 2018
  • Thursday, 6 December 2018
    08:00 Registration
    09:00 BRIDGE Overview: why MD and the value of this platform
    09:15 Logging into the platform
    09:30 Setup of an example protein (cellulase) with CHARMM-GUI
    09:50 Uploading datasets to BRIDGE
    10:05 Running the MD workflow (Hands on)
    10:30 Morning break
    11:00 Workflows in BRIDGE: Explanation of the steps of an MD workflow
    11:20 Creating your own history and workflow
    11:40 Analysis: Run an analysis workflow and analyse data
    12:00 Sharing data with collaborators
    12:15 Analysis: complete the workflow (Hands on)
    12:30 Lunch
    13:30 Resources and Support for Galaxy and BRIDGE
    13:50 Bring your own data – let’s see if this can work for you (Interactive)
    15:00 Afternoon break
    15:30 Q&A and testing with your own data sets (Interactive)
    17:00 End of Workshop