1-5 December 2019
Birchwood
Africa/Johannesburg timezone
Note: Intel Keynote starts at 18:00 today (Monday)

Accelerated free energy calculations using open-source tools

Not scheduled
8h
Birchwood

Birchwood

Workshop/Tutorial Proposal Workshop proposal Workshop

Speakers

Prof. Kevin J. Naidoo (University of Cape Town)Dr Chris Barnett (University of Cape Town) Tharindu Senapathi

Description

We will use open-source free energy tools and the Galaxy Platform (BRIDGE) to calculate absolute and relative free energies of protein-ligand binding. Setting up free energy molecular simulations, using scripts, the Linux command line and using HPC resources can be complex. Further not all steps are repeatable. With the Galaxy Project platform, BRIDGE and Galaxy Comp Chem we aim to provide a web application to assist researchers in conducting repeatable computer simulations and analysis using curated workflows.

Primary authors

Prof. Kevin J. Naidoo (University of Cape Town) Dr Chris Barnett (University of Cape Town) Tharindu Senapathi

Presentation Materials

There are no materials yet.