2018 CHPC National Conference

Molecular Dynamics and Analysis using BRIDGE

6 Dec 2018, 15:30

1h 30m

Meeting Room 9 ()

Workshop/BoF proposal Molecular Dynamics and Analysis using BRIDGE

Speakers

Dr Chris Barnett (University of Cape Town)Prof. Kevin J. Naidoo (University of Cape Town)

Description

Molecular Dynamics and analysis can be complicated for novitiates and researchers from neighbouring disciplines. Building upon the Galaxy Project platform, BRIDGE (Biomolecular Reaction & Interaction Dynamics Global Environment) is a web application that provides the ability to get started running molecular dynamics and analyses using curated workflows.

Target Audience: Computational chemists, biologists, protein scientists, crystallographers and anyone interested in running and analysing molecular dynamics simulations who is not familiar with the command line.

Prerequisites: Basic understanding of chemistry. A basic understanding of or keen interest in molecular dynamics.

Special requirements: Bring a laptop. Have access to the CHPC cluster. Register with BRIDGE. Install molecular viewer e.g. VMD.

Day: Thursday (6 Dec)
Duration: 1 day
Size: 15 seats