30 November 2020 to 2 December 2020
Africa/Johannesburg timezone
Thank you to all the contributers and attendees.

Electron density in uncovering reaction mechanism

1 Dec 2020, 11:00
30m
Talk Computational Chemistry HPC Applications

Speaker

Prof. Ignacy Cukrowski (University of Pretoria, Department of Chemistry)

Description

A REP-FAMSEC (reaction energy profile–fragment attributed molecular system energy change) protocol designed to explain each consecutive energy change along the reaction pathway will be briefly described. Electron density-dependant energy components defined in the Interacting Quantum Atoms (IQA) energy partitioning scheme are used to explore interactions between meaningful polyatomic fragments of a molecular system. By quantifying energetic contributions, as defined within the REP-FAMSEC method, one can pin-point fragments (atoms) leading to or opposing a chemical change. Usefulness of the REP-FAMSEC method will be demonstrated, as a case study, on the proline catalysed aldol reaction for which a number of mechanisms is being debated for over four decades. Relative stability of S-proline conformers, their catalytic (in)activity and superior affinity of the higher energy conformer to acetone will be fully explained on an atomic and molecular fragment levels. Importance of the CHPC in running high level, time-, and resource-demanding quantum computing will also be advocated.

Student? No

Primary authors

Prof. Ignacy Cukrowski (University of Pretoria, Department of Chemistry) George Dhimba (University of Pretoria) Dr Darren Riley (Department of Chemistry, Faculty of Natural and Agricultural Sciences, University of Pretoria, Lynnwood Road, Pretoria, South Africa)

Presentation Materials

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